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Jacques Dainat Bioinformatics Knowledge
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Jacques Dainat Bioinformatics Knowledge
knowledge
Home
Bioinformatics
Bioinformatics
Formats
Formats
Specification
Specification
BAM / SAM
BED v1
CIGAR
CRAM v3.1
GFF / GTF all versions
Markdown
SUGAR
TEXTILE (Wiki)
VCF v4.4
VULGAR
Interesting ressources about formats
Conversion
Conversion
GFF to
GFF to
GTF
BED
Handling
Handling
FASTA
Annotation
Annotation
Genome
Mitochondrion
Chloroplast
Plasmid
Classification
Variant annotation
Visualisation
Cluster
Cluster
Schedulers commands comparison
Slurm
Rackham
Screen
Programming
Programming
Bash
Bash
Lecture
Cheat sheet
Useful commands
Bioconda
Git
Perl
Perl
Perl code profiler
Python
R
Nextflow
Resource
Resource
Course
Sites
Blogs
Sequencing
Statistics
level 1 - Basic commands
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level 2 - Advanced commands
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level 3 - Programming
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